<?xml version="1.0"?>
<feed xmlns="http://www.w3.org/2005/Atom" xml:lang="en">
	<id>http://atomix.app.uib.no/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=CynthiaBluteau</id>
	<title>Atomix - User contributions [en]</title>
	<link rel="self" type="application/atom+xml" href="http://atomix.app.uib.no/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=CynthiaBluteau"/>
	<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/Special:Contributions/CynthiaBluteau"/>
	<updated>2026-05-17T12:57:47Z</updated>
	<subtitle>User contributions</subtitle>
	<generator>MediaWiki 1.44.2</generator>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4732</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4732"/>
		<updated>2026-05-13T16:38:10Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
=References=&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4731</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4731"/>
		<updated>2026-05-13T16:37:15Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4730</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4730"/>
		<updated>2026-05-13T16:35:23Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=References=&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4729</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4729"/>
		<updated>2026-05-13T16:34:30Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==References==&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4728</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4728"/>
		<updated>2026-05-13T16:34:06Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4727</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4727"/>
		<updated>2026-05-13T16:33:51Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=== References ===&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4726</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4726"/>
		<updated>2026-05-13T16:32:57Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4725</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4725"/>
		<updated>2026-05-13T16:30:41Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Displaying the reference list */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4724</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4724"/>
		<updated>2026-05-13T16:29:16Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
== Usage ==&lt;br /&gt;
This template formats a journal citation for use inside &amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Basic example ===&lt;br /&gt;
To cite a journal article, place the following inside your text:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Emery, W. J., and R. E. Thomson&lt;br /&gt;
|year=2001&lt;br /&gt;
|paper_or_booktitle=Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7–5.6.8&lt;br /&gt;
|journal_or_publisher=Elsevier&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will produce a numbered reference in the text and a formatted entry in the Notes section.&lt;br /&gt;
&lt;br /&gt;
=== Displaying the reference list ===&lt;br /&gt;
At the bottom of the page, add:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;nowiki&amp;gt;&lt;br /&gt;
== Notes ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
This will display all citations defined with &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
=== Template parameters ===&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|authors=&amp;lt;/nowiki&amp;gt; — Full author list, formatted exactly as desired.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|year=&amp;lt;/nowiki&amp;gt; — Publication year.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|paper_or_booktitle=&amp;lt;/nowiki&amp;gt; — Title of the paper or chapter.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|journal_or_publisher=&amp;lt;/nowiki&amp;gt; — Journal name or publisher.&lt;br /&gt;
* &amp;lt;nowiki&amp;gt;|doi=&amp;lt;/nowiki&amp;gt; — DOI or ISBN.&lt;br /&gt;
&lt;br /&gt;
This template does not require any extensions and is safe for long‑term use.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4723</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4723"/>
		<updated>2026-05-13T16:10:30Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4722</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4722"/>
		<updated>2026-05-13T16:10:04Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4721</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4721"/>
		<updated>2026-05-13T16:09:25Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This is the &amp;quot;Cite journal&amp;quot; template.  It can be used to format textbooks and publications. DOI have issues displaying when there are less than ( &amp;lt;nowiki&amp;gt;&amp;lt;&amp;lt;/nowiki&amp;gt;) and greater than  &amp;lt;nowiki&amp;gt;&amp;gt;&amp;lt;/nowiki&amp;gt;operators. &lt;br /&gt;
&lt;br /&gt;
By default, the formatted references will appear at the bottom of the page. It&#039;s good practice to place a section &amp;lt;nowiki&amp;gt;==Notes==&amp;lt;/nowiki&amp;gt; at the bottom of the page. &lt;br /&gt;
&lt;br /&gt;
The template can be called in the following format if not using the form:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
{{Cite journal&lt;br /&gt;
|authors=&lt;br /&gt;
|journal_or_publisher=&lt;br /&gt;
|paper_or_booktitle=&lt;br /&gt;
|year=&lt;br /&gt;
|doi=&lt;br /&gt;
}}&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
For example doing &lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= K. R. Sreenivasan&lt;br /&gt;
|journal_or_publisher= Phys. Fluids&lt;br /&gt;
|paper_or_booktitle=  On the universality of the Kolmogorov constant&lt;br /&gt;
|year= 1995&lt;br /&gt;
|doi= 10.1063/1.868656&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
will create  a citation &amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= K. R. Sreenivasan&lt;br /&gt;
|journal_or_publisher= Phys. Fluids&lt;br /&gt;
|paper_or_booktitle=  On the universality of the Kolmogorov constant&lt;br /&gt;
|year= 1995&lt;br /&gt;
|doi= 10.1063/1.868656&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;.&lt;br /&gt;
You can continue referring to it using &amp;lt;nowiki&amp;gt;&amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;&amp;lt;/nowiki&amp;gt; that will reuse the correct reference &amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;/&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4720</id>
		<title>Template:Cite journal</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Template:Cite_journal&amp;diff=4720"/>
		<updated>2026-05-13T16:07:38Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This is the &amp;quot;Cite journal&amp;quot; template.  It can be used to format textbooks and publications. DOI have issues displaying when there are less than ( &amp;lt;nowiki&amp;gt;&amp;lt;&amp;lt;/nowiki&amp;gt;) and greater than  &amp;lt;nowiki&amp;gt;&amp;gt;&amp;lt;/nowiki&amp;gt;operators. &lt;br /&gt;
&lt;br /&gt;
By default, the formatted references will appear at the bottom of the page. It&#039;s good practice to place a section &amp;lt;nowiki&amp;gt;==Notes==&amp;lt;/nowiki&amp;gt; at the bottom of the page. &lt;br /&gt;
&lt;br /&gt;
The template can be called in the following format if not using the form:&lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
{{Cite journal&lt;br /&gt;
|authors=&lt;br /&gt;
|journal_or_publisher=&lt;br /&gt;
|paper_or_booktitle=&lt;br /&gt;
|year=&lt;br /&gt;
|doi=&lt;br /&gt;
}}&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
&lt;br /&gt;
For example doing &lt;br /&gt;
&amp;lt;pre&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= K. R. Sreenivasan&lt;br /&gt;
|journal_or_publisher= Phys. Fluids&lt;br /&gt;
|paper_or_booktitle=  On the universality of the Kolmogorov constant&lt;br /&gt;
|year= 1995&lt;br /&gt;
|doi= 10.1063/1.868656&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/pre&amp;gt;&lt;br /&gt;
will create  a citation &amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= K. R. Sreenivasan&lt;br /&gt;
|journal_or_publisher= Phys. Fluids&lt;br /&gt;
|paper_or_booktitle=  On the universality of the Kolmogorov constant&lt;br /&gt;
|year= 1995&lt;br /&gt;
|doi= 10.1063/1.868656&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;.&lt;br /&gt;
You can continue referring to it using &amp;lt;nowiki&amp;gt;&amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;&amp;gt;&amp;lt;/nowiki&amp;gt; that will reuse the correct reference &amp;lt;ref name=&amp;quot;Sreenivasan&amp;quot;/&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{{authors}}}. {{{year}}}. {{{paper_or_booktitle}}}. {{{journal_or_publisher}}}. doi:{{{doi}}}&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;lt;noinclude&amp;gt;&lt;br /&gt;
This template formats journal citations without requiring any extensions.&lt;br /&gt;
Usage example:&lt;br /&gt;
&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Example&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors=Lastname, A., and B. Lastname&lt;br /&gt;
|year=2020&lt;br /&gt;
|paper_or_booktitle=Title of the paper&lt;br /&gt;
|journal_or_publisher=Journal Name&lt;br /&gt;
|doi=10.1234/example&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==Notes==&lt;br /&gt;
&lt;br /&gt;
&amp;lt;/noinclude&amp;gt;&amp;lt;includeonly&amp;gt;&lt;br /&gt;
{{#arraymap:{{{authors|}}}|,|x|x|, &amp;lt;nowiki/&amp;gt;|and}}. {{{year}}}. &#039;&#039;{{{paper_or_booktitle}}}&#039;&#039;. {{{journal_or_publisher}}}. doi:[https://doi.org/{{{doi}}} {{{doi}}}]&lt;br /&gt;
&amp;lt;/includeonly&amp;gt;&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Quality_control_measures&amp;diff=4719</id>
		<title>Quality control measures</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Quality_control_measures&amp;diff=4719"/>
		<updated>2026-05-05T22:15:53Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Some elements of quality control can only be done after spectra have been computed and should be done before final estimates of &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; are reported:&lt;br /&gt;
&lt;br /&gt;
* Reject time series segments as inadequate for turbulence analysis&lt;br /&gt;
** List them here or link to new pages?&lt;br /&gt;
* Reject spectra (or parts of spectra)&lt;br /&gt;
** Spectral slope of fitted spectral observations (?)&lt;br /&gt;
** Misfit criteria&lt;br /&gt;
&lt;br /&gt;
* Identify frame interferences from the epsilon vales&lt;br /&gt;
* Plot spectra from all three velocity components to check for [[Large-scale turbulence anisotropy]]&lt;br /&gt;
* Determine the measurement noise levels in the time-domain {{FontColor|fg=white|bg=red|text=This is currently not implemented, would be best done on each segments at level 2}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Here are other quality indicators based on the estimated &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;:&lt;br /&gt;
* Propagated error from the confidence level of the spectra&lt;br /&gt;
&lt;br /&gt;
-----&lt;br /&gt;
Return to [[Spectral estimates and identifying the inertial subrange]]&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Data_processing_of_raw_measurements&amp;diff=4718</id>
		<title>Data processing of raw measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Data_processing_of_raw_measurements&amp;diff=4718"/>
		<updated>2026-05-05T22:15:00Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw&lt;br /&gt;
}}&lt;br /&gt;
The following are specific recommendations for processing raw measurements, which are non-specific to a brand/make of instrument. As such, initial removal of bad data based on recommendations of the instrument manufacturer should be performed first (e.g. removing data with low correlation). Following that, you must:&lt;br /&gt;
&lt;br /&gt;
* [[Velocity despiking|Despike the velocity observations]]&lt;br /&gt;
* [[Phase unwrapping]] if required&lt;br /&gt;
* Identify whether there is [[interference from the instrument frame]], and under which conditions&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Flow chart for velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
Continue to [[Preparing quality-controlled velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Data_processing_of_raw_measurements&amp;diff=4717</id>
		<title>Data processing of raw measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Data_processing_of_raw_measurements&amp;diff=4717"/>
		<updated>2026-05-05T21:59:52Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw&lt;br /&gt;
}}&lt;br /&gt;
The following are specific recommendations for processing raw measurements, which are non-specific to a brand/make of instrument. As such, initial removal of bad data based on recommendations of the instrument manufacturer should be performed first (e.g. removing data with low correlation). Following that, you must:&lt;br /&gt;
&lt;br /&gt;
* [[Velocity despiking|Despike the velocity observations]]&lt;br /&gt;
* [[Phase unwrapping]] if required&lt;br /&gt;
* Identify whether there is [[interference from the instrument frame]], and under which conditions&lt;br /&gt;
* Determine the measurement noise levels in the time-domain {{FontColor|fg=white|bg=red|text=This is currently not implemented, would be best done on each segments at level 2}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Flow chart for velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
Continue to [[Preparing quality-controlled velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4716</id>
		<title>Flow chart for velocity point-measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4716"/>
		<updated>2026-05-05T21:40:20Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;The subgroup will provide recommendations and [[benchmark datasets for velocity measurements|benchmark datasets]] that can be used to assess processing algorithm at various stages of estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;:&lt;br /&gt;
[[File:Advprocessing.png|400px|thumb|Placeholder for complete flow chart for processing velocity point-measurements.]]&lt;br /&gt;
&lt;br /&gt;
# [[Data processing of raw measurements|Data processing of raw velocities]]&lt;br /&gt;
# [[Preparing quality-controlled velocities|Segmenting and preparing quality-controlled velocities]] for spectral computations&lt;br /&gt;
# [[Compute_the_spectra|Spectral estimates]]&lt;br /&gt;
# [[Estimate epsilon|Estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]] and its associated [[Quality control measures|quality control measures]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
These four processing levels coincide with the hierarchal format of the ATOMIX [[NetCDF velocimeters format]] used for archiving the [[benchmark datasets for velocity measurements|benchmark datasets]].&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4715</id>
		<title>Flow chart for velocity point-measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4715"/>
		<updated>2026-05-05T21:38:42Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;The subgroup will provide recommendations and [[benchmark datasets for velocity measurements|benchmark datasets]] that can be used to assess processing algorithm at various stages of estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;:&lt;br /&gt;
[[File:Advprocessing.png|400px|thumb|Placeholder for complete flow chart for processing velocity point-measurements.]]&lt;br /&gt;
&lt;br /&gt;
# [[Data processing of raw measurements|Data processing of raw velocities]]&lt;br /&gt;
# [[Preparing quality-controlled velocities|Segmenting and preparing quality-controlled velocities]] for spectral computations&lt;br /&gt;
# [[Spectral estimates]]&lt;br /&gt;
# [[Estimate epsilon|Estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]] and its associated [[Quality control measures|quality control measures]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
These four processing levels coincide with the hierarchal format of the ATOMIX [[NetCDF velocimeters format]] used for archiving the [[benchmark datasets for velocity measurements|benchmark datasets]].&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=How_to_use_and_contribute&amp;diff=4714</id>
		<title>How to use and contribute</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=How_to_use_and_contribute&amp;diff=4714"/>
		<updated>2026-05-05T21:35:44Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Peer-review and commenting */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;We collated [[Editing tips|editing tips]] for the wiki collected from other sources and individual&#039;s experiences using the wiki. The information below provides some brief guidelines on creating and commenting ATOMIX&#039;s wiki pages.&lt;br /&gt;
&lt;br /&gt;
== Creating and editing wiki pages ==&lt;br /&gt;
Existing ATOMIX group members may [[Create and edit wiki|create and edit]] existing wiki pages provided they have a user account.  &lt;br /&gt;
&lt;br /&gt;
=== Naming of new pages ===&lt;br /&gt;
Please follow the same [https://en.m.wikipedia.org/wiki/Wikipedia:Article_titles guidelines] as Wikipedia when providing titles for any wiki pages.&lt;br /&gt;
* Avoid starting titles with articles and prepositions  (e.g., avoid &amp;quot;The&amp;quot; and &amp;quot;A&amp;quot;)&lt;br /&gt;
* No acronyms unless they well known (e.g., ADCP)&lt;br /&gt;
* First letter is capitalised &lt;br /&gt;
* Title should reflect the content of the page, and not be chosen to match nicely with the text that links to it.&lt;br /&gt;
&lt;br /&gt;
=== Linking (piping) pages ===&lt;br /&gt;
You can link to internal wiki pages via alternate text. For example writing &amp;lt;nowiki&amp;gt;[[Turbulence spectrum| turbulence page]]&amp;lt;/nowiki&amp;gt;  will link the words [[Turbulence spectrum| turbulence page]] to an internal page called Turbulence spectrum.&lt;br /&gt;
&lt;br /&gt;
=== Format of new page ===&lt;br /&gt;
All pages should start with an introduction or lead of some sort, unless you&#039;re using the concept/fundamental form.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
==Watching pages==&lt;br /&gt;
Each user has under their account profile their list of [[Special:Watchlist|watched pages]]. By default, all pages that you edit are &amp;quot;watched&amp;quot;, but you can edit which ones and control how (if) you are notified about edits of these pages as they occur.&lt;br /&gt;
&lt;br /&gt;
== Peer-review and commenting ==&lt;br /&gt;
* Each page has a discussion page associated with it that allows users to discuss content about the page. &lt;br /&gt;
** These discussion pages are &#039;&#039;&#039;not&#039;&#039;&#039; for tracking or versioning your edits. There&#039;s a &amp;quot;history&amp;quot; toggle you can use for this purpose. &lt;br /&gt;
* Please take a look at [[Talk:How_to_use_and_contribute|discussion page]] for help on threaded comments to use on discussion pages.&lt;br /&gt;
** Using 4 tildes &amp;lt;nowiki&amp;gt;~~~~&amp;lt;/nowiki&amp;gt; will sign your username and date automatically&lt;br /&gt;
&lt;br /&gt;
==Citing and references==&lt;br /&gt;
* To streamline formatting of published papers, please follow the instructions from the [[Template:Cite_journal| Cite journal]] template within the &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt; tags.&lt;br /&gt;
&lt;br /&gt;
* By default, the formatted references will appear at the bottom of the page. It&#039;s good practice to place a section &amp;lt;nowiki&amp;gt;==Notes==&amp;lt;/nowiki&amp;gt; at the bottom of the page. &lt;br /&gt;
&lt;br /&gt;
* The &amp;lt;nowiki&amp;gt;&amp;lt;references/&amp;gt;&amp;lt;/nowiki&amp;gt; tag inserts the text of all the citations which have defined using   &amp;lt;nowiki&amp;gt;&amp;lt;ref&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;/nowiki&amp;gt;tags up to that point in the page.&lt;br /&gt;
&lt;br /&gt;
==Categorizing information==&lt;br /&gt;
There are a few categories for organising pages. Whenever possible, please include the subgroup categories:&lt;br /&gt;
* [[:Category:Shear_probes]] &lt;br /&gt;
* [[:Category:Velocity_point-measurements]] &lt;br /&gt;
* [[:Category:Velocity_profilers‏‎]] &lt;br /&gt;
at the bottom of the page when not using &amp;quot;edit with forms&amp;quot; such as those associated with&lt;br /&gt;
* [[:Category:Concept]] and [[:Category:Fundamentals]] pages.&lt;br /&gt;
&lt;br /&gt;
 To add a category use &amp;lt;nowiki&amp;gt;[[Category|Name_of_category]]&amp;lt;/nowiki&amp;gt;. &lt;br /&gt;
&lt;br /&gt;
This page uses the &amp;lt;nowiki&amp;gt;[[Category|Help]]&amp;lt;/nowiki&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Help]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4713</id>
		<title>Flow chart for velocity point-measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4713"/>
		<updated>2026-05-05T21:28:48Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;The subgroup will provide recommendations and [[benchmark datasets for velocity measurements|benchmark datasets]] that can be used to assess processing algorithm at various stages of estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;:&lt;br /&gt;
[[File:Advprocessing.png|400px|thumb|Placeholder for complete flow chart for processing velocity point-measurements.]]&lt;br /&gt;
&lt;br /&gt;
# [[Data processing of raw measurements|Data processing of raw velocities]]&lt;br /&gt;
# [[Preparing quality-controlled velocities|Segmenting and preparing qaqc velocities]] for spectral computations&lt;br /&gt;
# [[Spectral estimates and identifying the inertial subrange]]&lt;br /&gt;
# [[Estimate epsilon|Estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]] and its associated [[Quality control measures|quality control measures]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
These four processing levels coincide with the hierarchal format of the ATOMIX [[NetCDF velocimeters format]] used for archiving the [[benchmark datasets for velocity measurements|benchmark datasets]].&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4712</id>
		<title>Flow chart for velocity point-measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Flow_chart_for_velocity_point-measurements&amp;diff=4712"/>
		<updated>2026-05-05T21:28:22Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;The subgroup will provide recommendations and [[benchmark datasets for velocity measurements|benchmark datasets]] that can be used to assess processing algorithm at various stages of estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;:&lt;br /&gt;
[[File:Advprocessing.png|400px|thumb|Placeholder for complete flow chart for processing velocity point-measurements.]]&lt;br /&gt;
&lt;br /&gt;
# [[Data processing of raw measurements|Data processing of raw velocities]]&lt;br /&gt;
# [[Preparing quality-controlled velocities|Segmenting and preparing qaqc velocities]] for spectral computations&lt;br /&gt;
# [[Spectral estimates and identifying the inertial subrange]]&lt;br /&gt;
# [[Estimate epsilon|Estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]] and associated [[Quality control measures|quality control measures]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
These four processing levels coincide with the hierarchal format of the ATOMIX [[NetCDF velocimeters format]] used for archiving the [[benchmark datasets for velocity measurements|benchmark datasets]].&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Velocity point-measurements]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4711</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4711"/>
		<updated>2026-05-05T21:21:12Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in [https://doi.org/10.5281/zenodo.16798905 Zenodo].&lt;br /&gt;
They will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4710</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4710"/>
		<updated>2026-05-05T21:18:46Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in [https://doi.org/10.5281/zenodo.16798905 Zenodo]. They will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4709</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4709"/>
		<updated>2026-05-05T21:15:48Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in [https://doi.org/10.5281/zenodo.16798905 Zenodo]. and will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4708</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4708"/>
		<updated>2026-05-04T16:47:23Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in a [https://doi.org/10.5281/zenodo.16798905|Zenodo], and will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4707</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4707"/>
		<updated>2026-05-04T16:46:28Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in a [https://doi.org/10.5281/zenodo.16798905| Zenodo], and will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4706</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4706"/>
		<updated>2026-05-04T16:33:00Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are currently located in a [https://doi.org/10.5281/zenodo.16798905], and will eventually be housed at the BODC center.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4705</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4705"/>
		<updated>2026-05-04T16:29:46Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: Updated&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are temporarily in a [http://gofile.me/5BB4l/2dqqVVDUZ|read-only folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment  distance from boundary&lt;br /&gt;
! Background median speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| 0.26&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 5&lt;br /&gt;
| 0.03&lt;br /&gt;
| 3e-9 to 7e-8&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5 m beneath the ice&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 1.1&lt;br /&gt;
| 3e-4 to 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4704</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4704"/>
		<updated>2026-05-04T16:22:30Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are temporarily in a [http://gofile.me/5BB4l/2dqqVVDUZ|read-only folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment height above bottom&lt;br /&gt;
! Background speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal Slough ADV&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15-0.2&lt;br /&gt;
| 1e-8 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal Shelf ADV &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| &amp;lt;0.65&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 248&lt;br /&gt;
| 0.05&lt;br /&gt;
| 1e-8 to 1e-6&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5m depth&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 0.9 to 1.1&lt;br /&gt;
| 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_ADCP_structure_function&amp;diff=4698</id>
		<title>Benchmark datasets for ADCP structure function</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_ADCP_structure_function&amp;diff=4698"/>
		<updated>2025-01-05T00:25:15Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;This page provides an overview of the benchmark dataset for instruments that measure velocity profiles e.g., [[Acoustic-Doppler Current Profilers|acoustic-Doppler current profilers]] from diverse suppliers and models.&lt;br /&gt;
&lt;br /&gt;
== Datasets available ==&lt;br /&gt;
Selection and preparation of benchmark datasets are a work in progress! These benchmark datasets will cover a range of marine environments, background stratification, and flow fields. They are temporarily in this [http://gofile.me/5BB4l/sApY8EvAp|read-only folder] and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Instrument&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment height above bottom&lt;br /&gt;
! Background speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! &lt;br /&gt;
! Make and Model&lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Signature5beam_TidalShelf&lt;br /&gt;
| Nortek Signature1000&lt;br /&gt;
| 254&lt;br /&gt;
| 0.3&lt;br /&gt;
| &amp;lt;math&amp;gt;\lesssim&amp;lt;/math&amp;gt; 0.3&lt;br /&gt;
| &lt;br /&gt;
| stratified boundary layer&lt;br /&gt;
| pretty average&lt;br /&gt;
|&lt;br /&gt;
|-&lt;br /&gt;
| RDI4beam_TidalChannel_GP130620BPb&lt;br /&gt;
| RDI Teledyne 600kHz&lt;br /&gt;
| 23&lt;br /&gt;
| 0.5&lt;br /&gt;
| 2.5&lt;br /&gt;
| 7e-6 to 2e-4&lt;br /&gt;
| unstratified&lt;br /&gt;
| high quality data&lt;br /&gt;
|&lt;br /&gt;
|- &lt;br /&gt;
| RDIWH600_CANDYFLOSS_TOP&lt;br /&gt;
| RDI Workhorse 600 kHz&lt;br /&gt;
| 145&lt;br /&gt;
| 125&lt;br /&gt;
|&lt;br /&gt;
| 1e-7&lt;br /&gt;
| region of surface wave influence &lt;br /&gt;
| good&lt;br /&gt;
|&lt;br /&gt;
|- &lt;br /&gt;
| RDIWH600_CANDYFLOSS_BEDFRAME&lt;br /&gt;
| RDI Workhorse 600kHz&lt;br /&gt;
| 145&lt;br /&gt;
| 1&lt;br /&gt;
|&lt;br /&gt;
| 1e-7&lt;br /&gt;
| bottom boundary layer on NW European shelf&lt;br /&gt;
| good&lt;br /&gt;
|&lt;br /&gt;
|- &lt;br /&gt;
| AQD_Windermere_BEDFRAME&lt;br /&gt;
| Nortek Aquadopp 1MHz&lt;br /&gt;
| 40&lt;br /&gt;
| 0.4&lt;br /&gt;
| &amp;lt;0.1 &lt;br /&gt;
| 1e-9 to 1e-8&lt;br /&gt;
| lake bottom boundary layer &lt;br /&gt;
| good&lt;br /&gt;
|&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
-------------------------&lt;br /&gt;
return to [[Velocity profilers| Velocity Profilers Welcome Page]]&lt;br /&gt;
[[Category:Velocity profilers]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4697</id>
		<title>Benchmark datasets for velocity measurements</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Benchmark_datasets_for_velocity_measurements&amp;diff=4697"/>
		<updated>2025-01-05T00:23:57Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;These datasets are temporarily in a [http://gofile.me/5BB4l/2dqqVVDUZ|read-only folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable&amp;quot; &lt;br /&gt;
|+Summary of potential benchmark datasets for testing existing and future algorithms&lt;br /&gt;
|-&lt;br /&gt;
! style=&amp;quot;width: 12%&amp;quot;| Dataset name&lt;br /&gt;
! Total depth&lt;br /&gt;
! Deployment height above bottom&lt;br /&gt;
! Background speed&lt;br /&gt;
! &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; range&lt;br /&gt;
! Stratification/shear information&lt;br /&gt;
! style=&amp;quot;width: 20%&amp;quot;| Comment&lt;br /&gt;
|-&lt;br /&gt;
! Units &lt;br /&gt;
! [m]&lt;br /&gt;
! [m]&lt;br /&gt;
! [m/s]&lt;br /&gt;
! [W/kg]&lt;br /&gt;
! &lt;br /&gt;
! &lt;br /&gt;
|-&lt;br /&gt;
| Tidal slough&lt;br /&gt;
| 2.8&lt;br /&gt;
|  0.45&lt;br /&gt;
| 0.15-0.2&lt;br /&gt;
| 1e-8 to 1e-5&lt;br /&gt;
| Unstratified, but shear-induced anisotropy&lt;br /&gt;
| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.&lt;br /&gt;
|-&lt;br /&gt;
| Tidal shelf low quality &lt;br /&gt;
| 185&lt;br /&gt;
| 0.4&lt;br /&gt;
| &amp;lt;0.3 but usually 0.1&lt;br /&gt;
| 1e-7 to 1e-4&lt;br /&gt;
| Bottom one in log-layer using the classical definition&lt;br /&gt;
| Low-quality &amp;amp; noisy dataset&lt;br /&gt;
|-&lt;br /&gt;
| Tidal shelf high quality &lt;br /&gt;
| 250&lt;br /&gt;
| 0.4&lt;br /&gt;
| &amp;lt;0.65&lt;br /&gt;
| 1e-7 to 1e-5&lt;br /&gt;
| Stratified bottom log-layer &lt;br /&gt;
| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.&lt;br /&gt;
|-&lt;br /&gt;
| Underice MAVS&lt;br /&gt;
| 353&lt;br /&gt;
| 248&lt;br /&gt;
| 0.05&lt;br /&gt;
| 1e-8 to 1e-6&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Under-ice boundary layer, MAVS suspended 5m depth&lt;br /&gt;
|-&lt;br /&gt;
| Tidal MAVS&lt;br /&gt;
| 20&lt;br /&gt;
| 1.45&lt;br /&gt;
| 0.9 to 1.1&lt;br /&gt;
| 1e-3&lt;br /&gt;
| Weak stratification&lt;br /&gt;
| Strong tidal flows&lt;br /&gt;
|-&lt;br /&gt;
| Intertidal small waves&lt;br /&gt;
| {{FontColor|fg=white|bg=red|text=ask JM}}&lt;br /&gt;
| 0.4&lt;br /&gt;
|&amp;lt;0.18&lt;br /&gt;
| {{FontColor|fg=white|bg=red|text=1e-6}}&lt;br /&gt;
| coastal area with weak stratification&lt;br /&gt;
| std(U)/mean(U) is roughly 1 (JM)&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Tentative_benchmarks_for_shear_probes&amp;diff=4456</id>
		<title>Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Tentative_benchmarks_for_shear_probes&amp;diff=4456"/>
		<updated>2022-10-17T19:22:05Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* File name when testing */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Please follow the [[Filename convention for testing]] if changing the filename prefix supplied in this table. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
==File name when testing==&lt;br /&gt;
FilenamePrefix_II.nc​&lt;br /&gt;
where II is your initials (use as many letters as needed)​.&lt;br /&gt;
&lt;br /&gt;
&#039;&#039;&#039;The table should include only prefix, not the full testing filename&#039;&#039;&#039;&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
|  VMP250_TidalChannel_024&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| Nemo_MR1000_Minas_Passage_InStream&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|-&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category: Shear probes]]&lt;br /&gt;
&lt;br /&gt;
-------------------------&lt;br /&gt;
return to [[Shear probes]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4455</id>
		<title>Talk:Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4455"/>
		<updated>2022-10-17T19:19:07Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;New priority table for discussion. The original table issued during dec meeting has crept. Many datasets were added without approval from the WG. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
I suggest the following priority list to make the workload more manageable [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 02:22, 2 July 2022 (CEST)&lt;br /&gt;
&lt;br /&gt;
New testers should be added given the removal of some files..&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
| VMP250_TidalChannel_024_cs&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a constant speed of &amp;lt;math&amp;gt;0.75\, \mathrm{m\,s^{-1}}&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| VMP250_TidalChannel_024&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| VMP_SA_Sodwana_Bay_KZN_048&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Agulhas Current&lt;br /&gt;
| Lueck&lt;br /&gt;
| Moderately intense turbulence. Two sections: one good, the other has descent glitches&lt;br /&gt;
| Holtermann, George&lt;br /&gt;
|-&lt;br /&gt;
| CPF_MR1000_Monterey_Bay_19_8&lt;br /&gt;
| Uprising float&lt;br /&gt;
| MR-1000&lt;br /&gt;
| Monterey Bay&lt;br /&gt;
| Lueck&lt;br /&gt;
| Example of a float rising at &amp;lt;math&amp;gt;0.20\,\mathrm{m\,s^{-1}}&amp;lt;/math&amp;gt;; some wave orbital interference.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| mCTD_VL_StJohns_River_070&lt;br /&gt;
| Small boat&lt;br /&gt;
| mCTD&lt;br /&gt;
| St. Jons River, Florida&lt;br /&gt;
| Lueck&lt;br /&gt;
| Example of multiple shallow profiles in an estuary.&lt;br /&gt;
| Le Boyer&lt;br /&gt;
|-&lt;br /&gt;
| MicroCTD_UQAM_Malaysia_047_10&lt;br /&gt;
| Small boat&lt;br /&gt;
| mCTD&lt;br /&gt;
| Freshwater reservoir in Malaysia&lt;br /&gt;
| Lueck&lt;br /&gt;
| Example of poor data that looks good in a vertical profile of shear.&lt;br /&gt;
| Le Boyer, George&lt;br /&gt;
|-&lt;br /&gt;
| VMP2000_Test_HaroStrait&lt;br /&gt;
| Small ship&lt;br /&gt;
| VMP-2000&lt;br /&gt;
| Haro Strait, tidal channel&lt;br /&gt;
| Lueck&lt;br /&gt;
| Example of profiler with several narrow banded vibrations.&lt;br /&gt;
| Le Boyer&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| AUV_MicroRider_BarentsSea&lt;br /&gt;
| AUV&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| Propelled vehicle&lt;br /&gt;
| Dengler,Le Boyer&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| VMP6000_OgasawaraRidge&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-6000&lt;br /&gt;
| Ogasawara Ridge (western Pacific)&lt;br /&gt;
| Hibiya&lt;br /&gt;
| Untethered; &amp;gt;3000 m profile&lt;br /&gt;
| Lueck&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_Shelf_Peru&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&amp;lt;br /&amp;gt;&lt;br /&gt;
| Continental slope off Peru, eastern tropical Pacific&lt;br /&gt;
| Dengler&lt;br /&gt;
| Electromagnetic current meter; strong tidal currents&lt;br /&gt;
| Le Boyer&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| MSS_ArcticOcean&lt;br /&gt;
| Ice&lt;br /&gt;
| MSS&lt;br /&gt;
| Arctic Ocean&lt;br /&gt;
| Meyer&lt;br /&gt;
| &lt;br /&gt;
| Lueck&lt;br /&gt;
|-&lt;br /&gt;
| VMP6000_NorwegianSea&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-6000&lt;br /&gt;
| Norwegian Sea&lt;br /&gt;
| Fer&lt;br /&gt;
| In a strong &amp;amp; deep anticyclone, full depth (&amp;gt;3000 m)&lt;br /&gt;
| Inoue&lt;br /&gt;
|-&lt;br /&gt;
| Ice_VMP250upriser_ArcticOcean&lt;br /&gt;
| Ice&lt;br /&gt;
| VMP-250 upriser&lt;br /&gt;
| Arctic Ocean&lt;br /&gt;
| Fer&lt;br /&gt;
| One good and bad profile to highlight challenges with an upriser&lt;br /&gt;
| Bluteau&lt;br /&gt;
|-&lt;br /&gt;
| Nemo_MR1000_Minas_Passage_InStream&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Tentative_benchmarks_for_shear_probes&amp;diff=4454</id>
		<title>Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Tentative_benchmarks_for_shear_probes&amp;diff=4454"/>
		<updated>2022-10-17T19:18:43Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* File name when testing */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Please follow the [[Filename convention for testing]] if changing the filename prefix supplied in this table. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
==File name when testing==&lt;br /&gt;
FilenamePrefix_II.nc​&lt;br /&gt;
where II is your initials (use as many letters as needed)​.&lt;br /&gt;
&lt;br /&gt;
&#039;&#039;&#039;The table should include only prefix, not the full testing filename&#039;&#039;&#039;&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
|  VMP250_TidalChannel_024&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| Nemo_MR1000_Minas_Passage_InStream&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|-&lt;br /&gt;
|}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category: Shear probes]]&lt;br /&gt;
&lt;br /&gt;
-------------------------&lt;br /&gt;
return to [[Shear probes]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4453</id>
		<title>Talk:Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4453"/>
		<updated>2022-10-17T19:15:33Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;New priority table for discussion. The original table issued during dec meeting has crept. Many datasets were added without approval from the WG. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
I suggest the following priority list to make the workload more manageable [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 02:22, 2 July 2022 (CEST)&lt;br /&gt;
&lt;br /&gt;
New testers should be added given the removal of some files..&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
|  VMP250_TidalChannel_024&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| Nemo_MR1000_Minas_Passage_InStream&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|-&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4452</id>
		<title>Talk:Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4452"/>
		<updated>2022-10-17T19:10:54Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;New priority table for discussion. The original table issued during dec meeting has crept. Many datasets were added without approval from the WG. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
I suggest the following priority list to make the workload more manageable [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 02:22, 2 July 2022 (CEST)&lt;br /&gt;
&lt;br /&gt;
New testers should be added given the removal of some files..&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
|  &amp;lt;s&amp;gt;VMP250_TidalChannel_024&amp;lt;/s&amp;gt;&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| MSS_ArcticOcean&lt;br /&gt;
| Ice&lt;br /&gt;
| MSS&lt;br /&gt;
| Arctic Ocean&lt;br /&gt;
| Meyer&lt;br /&gt;
| &lt;br /&gt;
| Lueck&lt;br /&gt;
|-&lt;br /&gt;
| &amp;lt;s&amp;gt;Nemo_MR1000_Minas_Passage_InStream&amp;lt;/s&amp;gt;&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|-&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4436</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4436"/>
		<updated>2022-07-14T00:03:22Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Minimum fft-length */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based]] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to [[Spectral fitting|fit]] over the inertial subrange given the spectral resolution is equal to the inverse of the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is  5x the [[#fftlength|fft-length]] unless band-averaging is employed during the [[Compute the spectra#specavg| spectral averaging]]. More details about the minimum degrees of freedom are given in the [[velocity decontamination by cospectral methods]] wikipage.&lt;br /&gt;
 &lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities|Preparing quality-controlled velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4435</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4435"/>
		<updated>2022-07-14T00:01:32Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Choosing segment-length */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based]] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is  5x the [[#fftlength|fft-length]] unless band-averaging is employed during the [[Compute the spectra#specavg| spectral averaging]]. More details about the minimum degrees of freedom are given in the [[velocity decontamination by cospectral methods]] wikipage.&lt;br /&gt;
 &lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities|Preparing quality-controlled velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4434</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4434"/>
		<updated>2022-07-13T23:53:06Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Overlapping segments */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based]] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is  5x the [[#fftlength|fft-length]] unless band-averaging is employed during the [[Compute the spectra#specavg| spectral averaging]]. More details about the minimum degrees of freedom are given in the [[[velocity decontamination by cospectral methods]] wikipage.&lt;br /&gt;
 &lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities|Preparing quality-controlled velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4433</id>
		<title>Talk:Tentative benchmarks for shear probes</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Talk:Tentative_benchmarks_for_shear_probes&amp;diff=4433"/>
		<updated>2022-07-11T20:42:47Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;New priority table for discussion. The original table issued during dec meeting has crept. Many datasets were added without approval from the WG. These datasets are temporarily in a [https://www.dropbox.com/sh/ybbpauv5e2n8xyp/AAAgL55HqB50DQd2J11m7kl9a?dl=0|read-only dropbox folder], and will eventually be housed at the BODC center with a DOI.&lt;br /&gt;
&lt;br /&gt;
I suggest the following priority list to make the workload more manageable [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 02:22, 2 July 2022 (CEST)&lt;br /&gt;
&lt;br /&gt;
New testers should be added given the removal of some files..&lt;br /&gt;
&lt;br /&gt;
{| class=&amp;quot;wikitable sortable&amp;quot; &lt;br /&gt;
|-&lt;br /&gt;
! Filename Prefix&lt;br /&gt;
! Platform&lt;br /&gt;
! Instrument&lt;br /&gt;
! Region&lt;br /&gt;
! PI (ATOMIX)&lt;br /&gt;
! Comment&lt;br /&gt;
! Volunteer testers &lt;br /&gt;
|-&lt;br /&gt;
|  &amp;lt;s&amp;gt;VMP250_TidalChannel_024&amp;lt;/s&amp;gt;&lt;br /&gt;
| Ship&lt;br /&gt;
| VMP-250&lt;br /&gt;
| Haro Strait&lt;br /&gt;
| Lueck&lt;br /&gt;
| Intense turbulence. | Large up/down drafts affecting fall rate; this one processed using a speed equal to  &amp;lt;math&amp;gt;\mathrm{d}P/\mathrm{d}t&amp;lt;/math&amp;gt;; some estimates require fitting to the inertial subrange.&lt;br /&gt;
| All testers who have their own code.&lt;br /&gt;
|-&lt;br /&gt;
| FLOAT_MR_KY1310_Kuroshio&lt;br /&gt;
| Float&lt;br /&gt;
| Micro-Rider 1000&lt;br /&gt;
| Kuroshio&lt;br /&gt;
| Inoue&lt;br /&gt;
| Low epsilon with slow speeds past the sensor, NAVIS float.&lt;br /&gt;
| Fer&lt;br /&gt;
|-&lt;br /&gt;
| EPSILOMETER_RockallTrough&lt;br /&gt;
| Ship&lt;br /&gt;
| Epsilometer&lt;br /&gt;
| Rockall Trough&lt;br /&gt;
| Le Boyer&lt;br /&gt;
| Strong turbulence in a canyon&lt;br /&gt;
| Lueck, Ilker&lt;br /&gt;
|-&lt;br /&gt;
| AUV_MicroRider_BarentsSea&lt;br /&gt;
| AUV&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| Propelled vehicle&lt;br /&gt;
| Dengler,Le Boyer&lt;br /&gt;
|-&lt;br /&gt;
| Glider_MicroRider_BarentsSea&lt;br /&gt;
| Glider&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Barents Sea (Arctic)&lt;br /&gt;
| Fer&lt;br /&gt;
| &lt;br /&gt;
| Dengler&lt;br /&gt;
|-&lt;br /&gt;
| MSS_BalticSea&lt;br /&gt;
| Ship&lt;br /&gt;
| MSS&lt;br /&gt;
| Baltic Sea&lt;br /&gt;
| Holtermann&lt;br /&gt;
| One good profile, one corrupted by jellyfish&lt;br /&gt;
|  Fer&lt;br /&gt;
|-&lt;br /&gt;
| MSS_ArcticOcean&lt;br /&gt;
| Ice&lt;br /&gt;
| MSS&lt;br /&gt;
| Arctic Ocean&lt;br /&gt;
| Meyer&lt;br /&gt;
| &lt;br /&gt;
| Lueck&lt;br /&gt;
|-&lt;br /&gt;
| Ice_VMP250upriser_ArcticOcean&lt;br /&gt;
| Ice&lt;br /&gt;
| VMP-250 upriser&lt;br /&gt;
| Arctic Ocean&lt;br /&gt;
| Fer&lt;br /&gt;
| One good and bad profile to highlight challenges with an upriser&lt;br /&gt;
| Bluteau&lt;br /&gt;
|-&lt;br /&gt;
| &amp;lt;s&amp;gt;Nemo_MR1000_Minas_Passage_InStream&amp;lt;/s&amp;gt;&lt;br /&gt;
| Mooring&lt;br /&gt;
| MicroRider&lt;br /&gt;
| Minas Passage (Bay of Fundy, NS)&lt;br /&gt;
| Lueck&lt;br /&gt;
| a swift tidal channel. Dissipation estimated from the inertial subrange&lt;br /&gt;
| Fer, Bluteau&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=User_talk:CynthiaBluteau&amp;diff=4431</id>
		<title>User talk:CynthiaBluteau</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=User_talk:CynthiaBluteau&amp;diff=4431"/>
		<updated>2022-07-11T15:49:59Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Concept pages */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;I am currently using this page as a general to-do list of &amp;quot;wanted pages&amp;quot;, and as a sandbox when I&#039;m creating templates (i.e., macros).&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=To-do (requested by others)=&lt;br /&gt;
edit text&lt;br /&gt;
&lt;br /&gt;
=Pages required=&lt;br /&gt;
* Add pics on landing ADV page. Done [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 18:13, 5 March 2022 (CET)&lt;br /&gt;
* Remove [[Spectral computations]] page and include the info in  [[Spectral estimates and identifying the inertial subrange]] wikis-age&lt;br /&gt;
==Concept pages==&lt;br /&gt;
* [[Rotation of the velocity measurements|Frame of reference]] explained&lt;br /&gt;
* Combine [[Segmenting time series]] with ADCP&lt;br /&gt;
* Burst sampling page if none already exists?&lt;br /&gt;
* Misfit criteria that don&#039;t duplicate shear probe.&lt;br /&gt;
* Phase unwrapping for ADV and ADCP. Julia M volunteered to write this page.&lt;br /&gt;
&lt;br /&gt;
==NetCDF format==&lt;br /&gt;
* Boolean flags explanation, with hyperlinks to NASA page and CF-compliant&lt;br /&gt;
* Boolean flags specifics for ADV subgroup.&lt;br /&gt;
* Brief explanation/links about following attributes:&lt;br /&gt;
** cell_methods&lt;br /&gt;
** bounds&lt;br /&gt;
&lt;br /&gt;
= Sandbox=&lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=purple|text=Nice color}}. I continue writing the rest of sentence.&lt;br /&gt;
&lt;br /&gt;
Start a new one &amp;lt;span style=&amp;quot;color:#FFFFFF; background:#FF69B4&amp;quot;&amp;gt; with this example.&amp;lt;/span&amp;gt;. Now got rid of the spaces...&lt;br /&gt;
&lt;br /&gt;
&amp;lt;math&amp;gt;\epsilon&amp;lt;\math&amp;gt;&lt;br /&gt;
{{ReviewStage&lt;br /&gt;
|toreview=Ready for review&lt;br /&gt;
|authors=Cynthia&lt;br /&gt;
|reviewer=Justine&lt;br /&gt;
|instrument_type=&lt;br /&gt;
}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[:Media:Proposal.pdf|Proposal]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=User_talk:CynthiaBluteau&amp;diff=4430</id>
		<title>User talk:CynthiaBluteau</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=User_talk:CynthiaBluteau&amp;diff=4430"/>
		<updated>2022-07-11T15:48:52Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Pages required */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;I am currently using this page as a general to-do list of &amp;quot;wanted pages&amp;quot;, and as a sandbox when I&#039;m creating templates (i.e., macros).&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
=To-do (requested by others)=&lt;br /&gt;
edit text&lt;br /&gt;
&lt;br /&gt;
=Pages required=&lt;br /&gt;
* Add pics on landing ADV page. Done [[User:CynthiaBluteau|CynthiaBluteau]] ([[User talk:CynthiaBluteau|talk]]) 18:13, 5 March 2022 (CET)&lt;br /&gt;
* Remove [[Spectral computations]] page and include the info in  [[Spectral estimates and identifying the inertial subrange]] wikis-age&lt;br /&gt;
==Concept pages==&lt;br /&gt;
* [[Rotation of the velocity measurements|Frame of reference]] explained&lt;br /&gt;
* Combine [[Segmenting time series]] with ADCP&lt;br /&gt;
* Burst sampling page if none already exists&lt;br /&gt;
* Misfit criteria that don&#039;t duplicate shear probe.&lt;br /&gt;
&lt;br /&gt;
==NetCDF format==&lt;br /&gt;
* Boolean flags explanation, with hyperlinks to NASA page and CF-compliant&lt;br /&gt;
* Boolean flags specifics for ADV subgroup.&lt;br /&gt;
* Brief explanation/links about following attributes:&lt;br /&gt;
** cell_methods&lt;br /&gt;
** bounds&lt;br /&gt;
&lt;br /&gt;
= Sandbox=&lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=purple|text=Nice color}}. I continue writing the rest of sentence.&lt;br /&gt;
&lt;br /&gt;
Start a new one &amp;lt;span style=&amp;quot;color:#FFFFFF; background:#FF69B4&amp;quot;&amp;gt; with this example.&amp;lt;/span&amp;gt;. Now got rid of the spaces...&lt;br /&gt;
&lt;br /&gt;
&amp;lt;math&amp;gt;\epsilon&amp;lt;\math&amp;gt;&lt;br /&gt;
{{ReviewStage&lt;br /&gt;
|toreview=Ready for review&lt;br /&gt;
|authors=Cynthia&lt;br /&gt;
|reviewer=Justine&lt;br /&gt;
|instrument_type=&lt;br /&gt;
}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[:Media:Proposal.pdf|Proposal]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Spectral_computations&amp;diff=4429</id>
		<title>Spectral computations</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Spectral_computations&amp;diff=4429"/>
		<updated>2022-07-11T15:47:56Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: Categorisation&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt; This page could be removed and included with the one that links here.&lt;br /&gt;
&lt;br /&gt;
After the initial round of data QA/QC, there are three stages to estimating the turbulent dissipation rate:&lt;br /&gt;
&lt;br /&gt;
* [[Compute the spectra]] with sufficient degrees of freedom to get a statistically robust &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; {{FontColor|fg=white|bg=red|text= The dof is only a requirement when cleaning with cospectral techniques given the MLE fitting algorithm will take into account the dof when yielding epsilon. If we were integrating the spectra like the shear probe, then sure the dof is very important. As for surface waves? Someone else needs to chime in}}&lt;br /&gt;
* Conduct further [[QA/QC specific to spectral analysis]]&lt;br /&gt;
* Estimate the [[Velocity past the sensor| mean flow past the sensor]] and if applicable the [[Surface wave statistics|surface wave statistics]] to choose the appropriate [[Velocity inertial subrange model| inertial subrange model]] for [[Spectral fitting|spectral fitting]]. &lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Spectral estimates and identifying the inertial subrange]]&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Spectral_computations&amp;diff=4428</id>
		<title>Spectral computations</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Spectral_computations&amp;diff=4428"/>
		<updated>2022-07-11T15:46:31Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;After the initial round of data QA/QC, there are three stages to estimating the turbulent dissipation rate:&lt;br /&gt;
&lt;br /&gt;
* [[Compute the spectra]] with sufficient degrees of freedom to get a statistically robust &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; {{FontColor|fg=white|bg=red|text= The dof is only a requirement when cleaning with cospectral techniques given the MLE fitting algorithm will take into account the dof when yielding epsilon. If we were integrating the spectra like the shear probe, then sure the dof is very important. As for surface waves? Someone else needs to chime in}}&lt;br /&gt;
* Conduct further [[QA/QC specific to spectral analysis]]&lt;br /&gt;
* Estimate the [[Velocity past the sensor| mean flow past the sensor]] and if applicable the [[Surface wave statistics|surface wave statistics]] to choose the appropriate [[Velocity inertial subrange model| inertial subrange model]] for [[Spectral fitting|spectral fitting]]. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4427</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4427"/>
		<updated>2022-07-11T15:44:18Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Choosing segment-length */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based]] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is  5x the [[#fftlength|fft-length]] unless band-averaging is employed during the [[Compute the spectra#specavg| spectral averaging]]. More details about the minimum degrees of freedom are given in the [[[velocity decontamination by cospectral methods]] wikipage.&lt;br /&gt;
 &lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Compute_the_spectra&amp;diff=4426</id>
		<title>Compute the spectra</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Compute_the_spectra&amp;diff=4426"/>
		<updated>2022-07-11T15:43:02Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Spectral averaging techniques */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;To compute the spectrum of the turbulent velocity fluctuations, you need to:&lt;br /&gt;
# Determine appropriate [[#fftlength|fft-length]] and  [[#specavg|spectral averaging]] for each data [[Segmenting datasets|segment]]&lt;br /&gt;
# Compute the spectrum using standard techniques &amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= Emery, W. J., and R. E. Thomson&lt;br /&gt;
|journal_or_publisher= Elsevier&lt;br /&gt;
|paper_or_booktitle=  Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7-5.6.8&lt;br /&gt;
|year= 2001&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Priestly1981&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= Priestly M.B.&lt;br /&gt;
|journal_or_publisher= Academic Press&lt;br /&gt;
|paper_or_booktitle=  Spectral analysis and time series: Multivariate series prediction and control&lt;br /&gt;
|year= 1981&lt;br /&gt;
|doi=(ISBN)0125649010&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
# Convert the spectrum from the time domain to the space domain using the mean speed past the sensor {{FontColor|fg=white|bg=red|text= only for steady flows, not required for surface wave analysis}}&lt;br /&gt;
# Compute degrees of freedom (dof)  and confidence intervals of the final spectra &amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;/&amp;gt; based on the assumption that the spectra observations are &amp;lt;math&amp;gt;\chi&amp;lt;/math&amp;gt;-squared distributed i.e., the turbulent velocities are gaussian (normally distributed).&lt;br /&gt;
&lt;br /&gt;
==&amp;lt;span id=&amp;quot;specavg&amp;quot;&amp;gt;Spectral averaging&amp;lt;/span&amp;gt; techniques==&lt;br /&gt;
Each segment is often subdivided into smaller [[#fftlength|fft-length]] long chunks (50% overlap), which are then windowed before estimating numerous spectra (FFT) that are block-averaged for increased statistical significance. Another averaging strategy is band-averaging spectra in the frequency domain, which allows the [[Segmenting datasets|segment length]] to be the same as the [[#fftlength|fft-length]]. A combination of both strategies is also possible. The final strategy depends on whether you need increased statistical significance for correcting motion-contaminated spectra using [[Velocity decontamination by cospectral methods|cospectral methods]], and the lowest frequencies (wavenumbers) you want to resolve. &lt;br /&gt;
&lt;br /&gt;
The spectrum&#039;s lowest resolved frequency and final resolution are the inverses of the [[#fftlength| fft-length]]. The [[#fftlength|fft-length]] dictates the lowest frequencies resolved by the spectra, while the Nyquist frequency (half the sampling rate) dictates the largest frequency of the spectra. Whether these high and low frequencies are used to estimate &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; depends on the measurement quality and whether they are located in the inertial subrange, respectively.&lt;br /&gt;
&lt;br /&gt;
[[File:Spectra computation.png|thumbnail|800px|Example vertical velocity spectra estimated from a 128-s long segment of observations, which highlights the spectral bandwidth and resolution using different spectral averaging strategies. Velocity spectra  The original spectra (black) were estimated using 7 fft blocks, each 32 s long with a 50% overlap and a Hanning window applied on each block in the time-domain (21 degrees of freedom). The colored lines are spectra computed from the same segment but using alternate spectral averaging strategies. In red, the fft-length was halved to 16 s (43 degrees of freedom), while the third example (in purple) uses a combination of block and band averaging with the same number of blocks as the first example (black) but three adjacent frequencies were averaged together in the frequency domain increasing the degrees of freedom to 58. Note: the lowest frequencies of this spectra example are likely outside the inertial subrange as the peaks are almost statistically significant i.e., there&#039;s a deterministic signature at the lowest frequencies. Spectral-fitting algorithms can skip these frequencies, so this does not pose an issue for estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]]&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4425</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4425"/>
		<updated>2022-07-11T15:33:23Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based]] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is  5x the [[#fftlength|fft-length]] unless band-averaging is employed during the [[Compute the spectra#specavg| spectral averaging]]. More details about the minimum degrees of freedom are given in the [[[velocity decontamination by cospectral methods]] wikipage.&lt;br /&gt;
 &lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4424</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4424"/>
		<updated>2022-07-11T15:29:47Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra,  important mainly if you use [[Velocity decontamination by cospectral methods| cospectral or coherence-based] methods to remove motion-induced contamination from the spectra&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is 4-5x the [[#fftlength|fft-length]].&lt;br /&gt;
 &lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4423</id>
		<title>Segmenting datasets</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Segmenting_datasets&amp;diff=4423"/>
		<updated>2022-07-11T15:28:49Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: /* Choosing segment-length */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{ADV processing&lt;br /&gt;
|instrument_type=ADV&lt;br /&gt;
|level=level 1 raw, level 2 segmented and quality controlled&lt;br /&gt;
}}&lt;br /&gt;
Once the raw observations have been [[Data processing of raw measurements|quality-controlled]], then you must split the time series into shorter segments by considering:&lt;br /&gt;
* [[Time and length scales of turbulence]]&lt;br /&gt;
* [[Stationarity]] of the segment and [[Taylor&#039;s Frozen Turbulence| Taylor&#039;s frozen turbulence hypothesis]]&lt;br /&gt;
* Required statistical significance of the resulting spectra (only important if you need to remove motion-induced contamination from the spectra)&lt;br /&gt;
 &lt;br /&gt;
 A good way to select the segment length is by inspecting the [[compute the spectra|computed spectra]] estimated from a  512-s long segment and an [[#fftlength|fft-length]] that is one-quarter of the segment length (128 s). Plotting these spectra against the theoretical spectral lines (see [[#specavg|Fig 2 and 3]]), enables identifying whether 1 decade of an inertial subrange is resolved with at least 8 spectral samples in this subrange. &lt;br /&gt;
&lt;br /&gt;
== Considerations ==&lt;br /&gt;
Measurements are typically collected in the following two ways:&lt;br /&gt;
* continuously, or in such long [[Burst sampling|bursts]] that they can be considered continuous&lt;br /&gt;
* short [[Burst sampling|bursts]] that are typically  at most 2-3x the expected largest [[Time and length scales of turbulence|turbulence time scales]] (e.g., 10 min in ocean environments)&lt;br /&gt;
This segmenting step dictates the minimum [[Burst sampling|burst]] duration when setting up your equipment. The act of chopping a time series into smaller subsets, i.e., segments, is effectively a form of low-pass (box-car) filtering. The length of the [[Segmenting datasets|segment]] in time is usually a more important consideration than [[Detrending time series#detrend_ex|detrending the time series]] when estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] of the final spectra. &lt;br /&gt;
&lt;br /&gt;
The shorter the segment, the higher the temporal resolution of the final &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; time series, and the more likely the segment will be [[Stationarity|stationary]]. The segment must remain sufficiently long such that the lowest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]] are retained by the [[Compute the spectra|computed spectra]]. This is particularly important when measurement noise drowns the highest wavenumber (frequencies) of the [[Velocity inertial subrange model|inertial subrange]]. Thus, using too short segments may inadvertently render the spectra unusable for deriving  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; from the [[Velocity inertial subrange model|inertial subrange]] by virtue of no longer resolving this subrange as shown in  ([[#fftlength|Fig. 1]]).&lt;br /&gt;
&lt;br /&gt;
[[File:ADV_fft_length.png|none|thumbnail|500px|Fig.1 Contours represent the log of the  &amp;lt;span id=&amp;quot;fftlength&amp;quot;&amp;gt;fft-length required to resolve the non-dimensional wavenumber [rad/m] indicated in each panel&#039;s title.  The inertial subrange ends at approximately &amp;lt;math&amp;gt;\hat{k}L_k\approx0.1&amp;lt;/math&amp;gt; (or &amp;lt;math&amp;gt;kL_k\approx0.015&amp;lt;/math&amp;gt; in cpm), and so panel (c) denotes the fft-length that resolves the end of the inertial subrange i.e., the beginning of the viscous subrange. The fft-length must be at least 10x longer (see b), preferably 50x (panel c) given the low number of spectral observations at the lowest frequencies (wavenumbers)]]&lt;br /&gt;
&lt;br /&gt;
== Recommendations==&lt;br /&gt;
A good rule of thumb for tidally-influenced environments is 5 to 15 min segments, but this may be shorter in certain energetic and fast-moving flows ([[#fastepsi|Fig. 2]]) and longer in less energetic environments ([[#lowepsi|Fig.3]]).  The final segment length is partly a function of the fft-length and the desired statistical significance (degrees of freedom) of the final [[Compute the spectra| computed spectra]]. If [[Velocity decontamination by cospectral methods| cospectral  methods]] will be employed to decontaminate the velocities, then the segment length should be 4-5x larger than the [[#fftlength|fft-length]] unless band-averaging is used to [[Compute the speectra#specavg| average the (co-)spectra]]. &lt;br /&gt;
&lt;br /&gt;
===Minimum fft-length===&lt;br /&gt;
[[#fftlength|Fig. 1]] provides a guide to the fft-length required for resolving different subrange as a function of the speed past the sensor, and &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  For instance, an fft-length of 4 s would resolve one decade of the inertial subrange at speeds past the sensor of 0.5 m/s and &amp;lt;math&amp;gt;\varepsilon\sim10^{-7}&amp;lt;/math&amp;gt; W/kg. Longer segments would be required for slower flows or lower &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;.  At &amp;lt;math&amp;gt;\varepsilon\approx10^{-9}&amp;lt;/math&amp;gt; W/kg, one decade of the inertial subrange would be resolved with an fft-length longer than 10s provided the speed was faster than 0.5 m/s. &lt;br /&gt;
&lt;br /&gt;
Because the inertial subrange may be contaminated at the highest wavenumbers by instrument noise, we suggest using longer segments than the minimum shown in [[#fftlength|Fig. 1b]]. This strategy also enables having a larger number of spectral observations to fit over the inertial subrange given the spectral resolution also depends on the fft-length.&lt;br /&gt;
&lt;br /&gt;
===Choosing segment-length===&lt;br /&gt;
The final segment length may be larger than the fft-length depending if you use block-averaging for [[Compute the spectra#specavg|computing the spectra]]. The maximum segment length should be shorter than the largest [[Time and length scales of turbulence|turbulent time scales]]. To increase the statistical reliability of the spectral observations, which is absolutely necessary when applying any [[Velocity decontamination by cospectral methods|co-spectral techniques]] for motion decontamination of spectra, we recommend segment length that is 4-5x the [[#fftlength|fft-length]].&lt;br /&gt;
 &lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=red|text= Are the peaks in the MAVS data vortex shedding from the rings. Check the motion sensors onboard?}}&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[File:Segment_anisotropy.png|left|thumbnail|350px|Fig. 2: Example theoretical velocity spectra for different  &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; with the empirical limit &amp;lt;math&amp;gt;\hat{k}L_k\sim0.1&amp;lt;/math&amp;gt;  denoted by the diamonds (&amp;lt;math&amp;gt;\hat{k}&amp;lt;/math&amp;gt; is in rad/m). The inertial subrange extends to smaller wavenumber &amp;lt;math&amp;gt;k&amp;lt;/math&amp;gt; [cpm] as &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; increases. The lowest frequency resolved by a spectra is the inverse of the fft-length used when computing the spectra. The colored lines are spectral observations from a dataset with &amp;lt;span id=&amp;quot;fastepsi&amp;quot;&amp;gt;fast speeds and large&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. In this example, we used relatively short segments (128s) to estimate the spectra from fft-length of 32 s (2048 samples @ 64 Hz). The impact of [[Velocity inertial subrange model#anisotropy|turbulence anisotropy]] is also visible through the flattening of the spectra around 1 cpm. The secondary x-axis show the corresponding frequencies for a range of mean speeds past the sensors]]&lt;br /&gt;
&lt;br /&gt;
[[File:SegmentAnisotropyLowE.png|center|thumbnail|350px|Fig. 3: Same as Fig 1 but for a different  dataset with &amp;lt;span id=&amp;quot;lowepsi&amp;quot;&amp;gt;low speeds and low&amp;lt;/span&amp;gt; &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;, requiring the use of relatively long segments (1024s) to estimate the spectra from fft-length of 512 s (4096 samples @ 8 Hz).]]&lt;br /&gt;
&lt;br /&gt;
===Overlapping segments===&lt;br /&gt;
Using overlapping segments, i.e., obtaining your first &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; estimate from time 0 to 5 min, and the second estimate from 2.5 to 5 min (50% overlap) essentially smoothes the final timeseries &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. One advantage of using overlapping segments is that you can recover estimates before and after sudden changes in flow conditions that render one segment unusable for getting &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;. The use of overlapping segments is purely a matter of preference, and does not impact the quality of the final timeseries of epsilon.&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
Return to [[Preparing_quality-controlled_velocities]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
	<entry>
		<id>http://atomix.app.uib.no/index.php?title=Compute_the_spectra&amp;diff=4422</id>
		<title>Compute the spectra</title>
		<link rel="alternate" type="text/html" href="http://atomix.app.uib.no/index.php?title=Compute_the_spectra&amp;diff=4422"/>
		<updated>2022-07-11T15:25:49Z</updated>

		<summary type="html">&lt;p&gt;CynthiaBluteau: Added wikilcnks&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;To compute the spectrum of the turbulent velocity fluctuations, you need to:&lt;br /&gt;
# Determine appropriate [[#fftlength|fft-length]] and  [[#specavg|spectral averaging]] for each data [[Segmenting datasets|segment]]&lt;br /&gt;
# Compute the spectrum using standard techniques &amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= Emery, W. J., and R. E. Thomson&lt;br /&gt;
|journal_or_publisher= Elsevier&lt;br /&gt;
|paper_or_booktitle=  Data analysis methods in physical oceanography, 2nd edition, Section 5.6.7-5.6.8&lt;br /&gt;
|year= 2001&lt;br /&gt;
|doi=(ISBN)9780080477008&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Priestly1981&amp;quot;&amp;gt;{{Cite journal&lt;br /&gt;
|authors= Priestly M.B.&lt;br /&gt;
|journal_or_publisher= Academic Press&lt;br /&gt;
|paper_or_booktitle=  Spectral analysis and time series: Multivariate series prediction and control&lt;br /&gt;
|year= 1981&lt;br /&gt;
|doi=(ISBN)0125649010&lt;br /&gt;
}}&amp;lt;/ref&amp;gt;&lt;br /&gt;
# Convert the spectrum from the time domain to the space domain using the mean speed past the sensor {{FontColor|fg=white|bg=red|text= only for steady flows, not required for surface wave analysis}}&lt;br /&gt;
# Compute degrees of freedom (dof)  and confidence intervals of the final spectra &amp;lt;ref name=&amp;quot;EmeryThomson2001&amp;quot;/&amp;gt; based on the assumption that the spectra observations are &amp;lt;math&amp;gt;\chi&amp;lt;/math&amp;gt;-squared distributed i.e., the turbulent velocities are gaussian (normally distributed).&lt;br /&gt;
&lt;br /&gt;
==&amp;lt;span id=&amp;quot;specavg&amp;quot;&amp;gt;Spectral averaging&amp;lt;/span&amp;gt; techniques==&lt;br /&gt;
Each segment is often subdivided into smaller [[#fftlength|fft-length]] long chunks (50% overlap), which are then windowed before estimating numerous spectra (FFT) that are block-averaged for increased statistical significance. Another averaging strategy is band-averaging spectra in the frequency domain, which allows the [[Segmenting datasets|segment length]] to be the same as the [[#fftlength|fft-length]]. A combination of both strategies is also possible. The final strategy depends on whether you need increased statistical significance for correcting motion-contaminated spectra using [[Velocity decontamination by cospectral methods|cospectral methods]], and the lowest frequencies (wavenumbers) you want to resolve. &lt;br /&gt;
&lt;br /&gt;
The spectrum&#039;s lowest resolved frequency and final resolution are the inverses of the [[#fftlength| fft-length]]. The [[#fftlength|fft-length]] dictates the lowest frequencies resolved by the spectra, while the Nyquist frequency (half the sampling rate) dictates the largest frequency of the spectra. Whether these high and low frequencies are used to estimate &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt; depends on the measurement quality and whether they are located in the inertial subrange, respectively.&lt;br /&gt;
&lt;br /&gt;
{{FontColor|fg=white|bg=red|text=  Remove redundant info from [[Segmenting datasets]], and add references to figure summary page}}&lt;br /&gt;
&lt;br /&gt;
[[File:Spectra computation.png|thumbnail|800px|Example vertical velocity spectra estimated from a 128-s long segment of observations, which highlights the spectral bandwidth and resolution using different spectral averaging strategies. Velocity spectra  The original spectra (black) were estimated using 7 fft blocks, each 32 s long with a 50% overlap and a Hanning window applied on each block in the time-domain (21 degrees of freedom). The colored lines are spectra computed from the same segment but using alternate spectral averaging strategies. In red, the fft-length was halved to 16 s (43 degrees of freedom), while the third example (in purple) uses a combination of block and band averaging with the same number of blocks as the first example (black) but three adjacent frequencies were averaged together in the frequency domain increasing the degrees of freedom to 58. Note: the lowest frequencies of this spectra example are likely outside the inertial subrange as the peaks are almost statistically significant i.e., there&#039;s a deterministic signature at the lowest frequencies. Spectral-fitting algorithms can skip these frequencies, so this does not pose an issue for estimating &amp;lt;math&amp;gt;\varepsilon&amp;lt;/math&amp;gt;]]&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
&lt;br /&gt;
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[[Category:Velocity point-measurements]]&lt;/div&gt;</summary>
		<author><name>CynthiaBluteau</name></author>
	</entry>
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