Atomix - Recent changes [en]

Template:Cite journal

CynthiaBluteau — Wed, 13 May 2026 16:38:10 GMT

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 <noinclude>
-This is the "Cite journal" template.  It can be used to format textbooks and publications. DOI have issues displaying when there are less than ( <nowiki><</nowiki>) and greater than  <nowiki>></nowiki>operators.
+== Usage ==
-By default, the formatted references will appear at the bottom of the page. It's good practice to place a section <nowiki>==Notes==</nowiki> at the bottom of the page.
+This will produce a numbered reference in the text and a formatted entry in the Notes section.
-The template can be called in the following format if not using the form:
+=== Displaying the reference list ===
-<pre>
+At the bottom of the page, add:
-For example doing
+<nowiki>
-<pre>
+== References ==
-<ref name="Sreenivasan">{{Cite journal
+</nowiki>
-==Notes==
+This template does not require any extensions and is safe for long‑term use.
-</noinclude><includeonly>
+<noinclude>
-{{#arraymap:{{{authors|}}}|,|x|x|, <nowiki/>|and}}. {{{year}}}. ''{{{paper_or_booktitle}}}''. {{{journal_or_publisher}}}. doi:[https://doi.org/{{{doi}}} {{{doi}}}]
+This template formats journal citations without requiring any extensions.
-</includeonly>
+Usage example:<ref name="Example">{{Cite journal

Quality control measures

CynthiaBluteau — Tue, 05 May 2026 22:15:53 GMT

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	* Identify frame interferences from the epsilon vales		* Identify frame interferences from the epsilon vales
	* Plot spectra from all three velocity components to check for [[Large-scale turbulence anisotropy]]		* Plot spectra from all three velocity components to check for [[Large-scale turbulence anisotropy]]
			* Determine the measurement noise levels in the time-domain {{FontColor\|fg=white\|bg=red\|text=This is currently not implemented, would be best done on each segments at level 2}}

Data processing of raw measurements

CynthiaBluteau — Tue, 05 May 2026 22:15:00 GMT

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	* [[Velocity despiking\|Despike the velocity observations]]		* [[Velocity despiking\|Despike the velocity observations]]
			* [[Phase unwrapping]] if required
	* Identify whether there is [[interference from the instrument frame]], and under which conditions		* Identify whether there is [[interference from the instrument frame]], and under which conditions
	* Determine the measurement noise levels in the time-domain {{FontColor\|fg=white\|bg=red\|text=This is currently not implemented, would be best done on each segments at level 2}}

Flow chart for velocity point-measurements

CynthiaBluteau — Tue, 05 May 2026 21:40:20 GMT

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	# [[Data processing of raw measurements\|Data processing of raw velocities]]		# [[Data processing of raw measurements\|Data processing of raw velocities]]
	# [[Preparing quality-controlled velocities\|Segmenting and preparing ~~qaqc~~ velocities]] for spectral computations		# [[Preparing quality-controlled velocities\|Segmenting and preparing quality-controlled velocities]] for spectral computations
	# [[Spectral estimates ~~and identifying the inertial subrange~~]]		# [[Compute_the_spectra\|Spectral estimates]]
	# [[Estimate epsilon\|Estimating <math>\varepsilon</math>]] and its associated [[Quality control measures\|quality control measures]]		# [[Estimate epsilon\|Estimating <math>\varepsilon</math>]] and its associated [[Quality control measures\|quality control measures]]

How to use and contribute

CynthiaBluteau — Tue, 05 May 2026 21:35:44 GMT

Peer-review and commenting

← Older revision		Revision as of 21:35, 5 May 2026
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	** These discussion pages are '''not''' for tracking or versioning your edits. There's a "history" toggle you can use for this purpose.		** These discussion pages are '''not''' for tracking or versioning your edits. There's a "history" toggle you can use for this purpose.
	* Please take a look at [[Talk:How_to_use_and_contribute\|discussion page]] for help on threaded comments to use on discussion pages.		* Please take a look at [[Talk:How_to_use_and_contribute\|discussion page]] for help on threaded comments to use on discussion pages.
	** Using 4 tildes <nowiki>~~~~</nowiki> will sign your username and date automatically		** Using 4 tildes <nowiki>~~~~</nowiki> will sign your username and date automatically
	* Eventually, we'll be accepting comments from the community when the processing steps will be delineated on the wiki. We're in the process of establishing the how and where, but it will be in the second half of 2022.
	* The [[:Form:ReviewStage\|Review stage form]] and [[:Template:ReviewStage\|template]] are being trialed to facilitate internal peer-reviewing.

	==Citing and references==		==Citing and references==

Flow chart for velocity point-measurements

CynthiaBluteau — Tue, 05 May 2026 21:28:48 GMT

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	# [[Preparing quality-controlled velocities\|Segmenting and preparing qaqc velocities]] for spectral computations		# [[Preparing quality-controlled velocities\|Segmenting and preparing qaqc velocities]] for spectral computations
	# [[Spectral estimates and identifying the inertial subrange]]		# [[Spectral estimates and identifying the inertial subrange]]
	# ~~[[Quality control measures]] of the~~ [[Estimate epsilon\|~~estimated~~ <math>\varepsilon</math>]]		# [[Estimate epsilon\|Estimating <math>\varepsilon</math>]] and its associated [[Quality control measures\|quality control measures]]

Benchmark datasets for velocity measurements

CynthiaBluteau — Tue, 05 May 2026 21:21:12 GMT

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	These datasets are ~~temporarily~~ in a [~~http~~://~~gofile~~.me/~~5BB4l~~/~~2dqqVVDUZ\|read-only folder~~]~~, and~~ will eventually be housed at the BODC center ~~with a DOI~~.		These datasets are currently located in [https://doi.org/10.5281/zenodo.16798905 Zenodo].
			They will eventually be housed at the BODC center.


	{\| class="wikitable"		{\| class="wikitable"
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	! style="width: 12%"\| Dataset name		! style="width: 12%"\| Dataset name
	! Total depth		! Total depth
	! Deployment ~~height above bottom~~		! Deployment distance from boundary
	! Background speed		! Background median speed
	! <math>\varepsilon</math> range		! <math>\varepsilon</math> range
	! Stratification/shear information		! Stratification/shear information
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	!		!
	\|-		\|-
	\| Tidal ~~slough~~		\| Tidal Slough ADV
	\| 2.8		\| 2.8
	\| 0.45		\| 0.45
	\| 0.15~~-0.2~~		\| 0.15
	\| 1e-8 to 1e-5		\| 1e-7 to 1e-5
	\| Unstratified, but shear-induced anisotropy		\| Unstratified, but shear-induced anisotropy
	\| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.		\| Viscous subrange is occasionally resolved. Another ADV at 0.15 m shows wrapping issues.
	\|-		\|-
	\| Tidal ~~shelf low quality~~		\| Tidal Shelf ADV
	\| ~~185~~		\| 250
	\| 0.4		\| 0.4
	\| <0.~~3 but usually 0.1~~		\| 0.26
	\| 1e-7 to 1e-4		\| 1e-7 to 1e-4
	~~\| Bottom one in log-layer using the classical definition~~
	~~\| Low-quality & noisy dataset~~
	\|-
	~~\| Tidal shelf high quality~~
	~~\| 250~~
	~~\| 0.4~~
	~~\| <0.65~~
	~~\| 1e-7 to 1e-5~~
	\| Stratified bottom log-layer		\| Stratified bottom log-layer
	\| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.		\| High-quality dataset with phase wrapping. It overlaps with an ADCP Signature benchmark.
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	\| Underice MAVS		\| Underice MAVS
	\| 353		\| 353
	\| ~~248~~		\| 5
	\| 0.05		\| 0.03
	\| 1e-8 to 1e-6		\| 3e-9 to 7e-8
	\| Weak stratification		\| Weak stratification
	\| Under-ice boundary layer, MAVS suspended ~~5m depth~~		\| Under-ice boundary layer, MAVS suspended 5 m beneath the ice
	\|-		\|-
	\| Tidal MAVS		\| Tidal MAVS
	\| 20		\| 20
	\| 1.45		\| 1.45
	\| ~~0.9 to~~ 1.1		\| 1.1
	\| 1e-3		\| 3e-4 to 1e-3
	\| Weak stratification		\| Weak stratification
	\| Strong tidal flows		\| Strong tidal flows
	\|-
	~~\| Intertidal small waves~~
	~~\| {{FontColor\|fg=white\|bg=red\|text=ask JM}}~~
	~~\| 0.4~~
	~~\|<0.18~~
	~~\| {{FontColor\|fg=white\|bg=red\|text=1e-6}}~~
	~~\| coastal area with weak stratification~~
	~~\| std(U)/mean(U) is roughly 1 (JM)~~
	\|}		\|}


	[[Category:Velocity point-measurements]]		[[Category:Velocity point-measurements]]

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	# [[Data processing of raw measurements\|Data processing of raw velocities]]		# [[Data processing of raw measurements\|Data processing of raw velocities]]
	# [[Preparing quality-controlled velocities\|Segmenting and preparing ~~qaqc~~ velocities]] for spectral computations		# [[Preparing quality-controlled velocities\|Segmenting and preparing quality-controlled velocities]] for spectral computations
	# [[Spectral estimates ~~and identifying the inertial subrange~~]]		# [[Compute_the_spectra\|Spectral estimates]]
	# [[Estimate epsilon\|Estimating <math>\varepsilon</math>]] and its associated [[Quality control measures\|quality control measures]]		# [[Estimate epsilon\|Estimating <math>\varepsilon</math>]] and its associated [[Quality control measures\|quality control measures]]