Rotation of the velocity measurements
Measured velocities must be rotated in the flow's frame of reference since inertial subrange model differs between the velocity components, and the effects of anisotropy are more pronounced in the transverse and vertical direction.
The velocities are measured in either the instrument's coordinate system (XYZ), beam coordinates or more rarely in the earth's coordinate system (east, north and up). Ideally, the instrument's x-axis is aligned with the general direction of the mean flow. Elaborate more why, for bbl flows when the vertical is hindered or when shear stress qty are desired (correlated noise is projected during rotations for some acoustic instruments).
Another key difference is that in the slough example (b), the instrument's x-axis was oriented along the length of the channel, and thus in the general direction of the flow. This is the ideal set-up for turbulence measurements from acoustic-Doppler velocity-meters.
