Netcdf meta data (shear probes)
From Atomix
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Below we list the metadata required in a NetCDF data file, as well as the optional meta data we highly recommend that are included with the data set.
The parameter names should be used as listed (attention to underscores). The descriptions are example text or several options that are available for that parameter.
Required Metadata
Attibute Name | Description | Convention |
---|---|---|
title | A comprehensive title for the dataset including the time and location aspect | CF, ACDD |
authors | A list of authors | ATOMIX |
summary | An abstract describing the dataset | ACCD |
comment | Supplementary technical details about the collecting and processing of the dataset | CF, ACDD |
platform_type | The platform from which the data are collected, e.g., sub-surface mooring, research vessel, sub-surface glider | ACDD |
source | The instrument used for collecting the data. For example, vertical microstructure profiler, VMP2000 SN009 | CF, ACDD |
date_created | The date on which the data were created, yyyy-mm-ddTHH:MM:SSZ | ACDD |
date_modified | The date on which the data were last modified, yyyy-mm-ddTHH:MM:SSZ | ACDD |
time_reference_year | Year for time reference | ATOMIX |
time_coverage_start | Time of the first data point in the dataset, yyyy-mm-ddTHH:MM:SSZ | ACDD |
time_coverage_end | Time of thelast data point in the dataset, yyyy-mm-ddTHH:MM:SSZ | ACDD |
geospatial_lat_min | Southern bound of data, decimal degrees, negative for South | ACDD |
geospatial_lat_max | Northern bound of data, decimal degrees, negative for South | ACDD |
geospatial_lon_min | Western bound of data, decimal degrees, negative for West | ACDD |
geospatial_lon_max | Eastern bound of data, decimal degrees, negative for West | ACDD |
fs_fast | Sampling frequency for fast (turbulence) channels | ATOMIX |
fs_slow [math]\displaystyle{ ^a }[/math] | Sampling frequency for slow channels (if exists). Alternative names could be, e.g., fs_CTD | ATOMIX |
profiling_direction | Direction along which the section was collected, e.g., horizontal, vertical, or glide | ATOMIX |
fft_length | Length of the Fast Fourier transform segments (in data points; note, fft_lengths_sec in seconds is optional) | ATOMIX |
diss_length | Length of data (in data points) used for each dissipation estimate | ATOMIX |
overlap | Length of overlap (in data points) in diss_length | ATOMIX |
goodman | Flag for the vibration coherent noise removal using the Goodman algorithm. 0=not applied; 1=applied | ATOMIX |
HP_cut | The high-pass filter cutoff frequency in Hz. Can be zero for no filtering. | ATOMIX |
conventions | A comma-separated list of the conventions that are followed by the dataset. e.g., CF-1.6, ACDD-1.3, ATOMIX | CF, ACDD |
history | Provides an audit trail for modifications to the original data; e.g., Version 1 | CF, ACDD |
It is highly recommended to duplicate relevant attributes at the corresponding group level. Attributes not listed in the Climate and Forecast (CF) and the Attribute Convention for Data Discovery (ACDD) standards are labeled as ATOMIX.
Optional Metadata
Attribute Name | Description | Convention |
---|---|---|
fft_length_sec | Length of the Fast Fourier transform segments in seconds | ATOMIX |
diss_length_sec | Dissipation estimate data length in seconds | ATOMIX |
overlap_sec | Length of overlap (in seconds) in diss_length_sec | ATOMIX |
f_AA | The anti-aliasing frequency in Hz | ATOMIX |
FOM_limit | Figure of merit limit for quality assurance. Typically between 1.15 and 1.4. | ATOMIX |
diss_ratio_limit | The limit to identify anomalously large disagreement between dissipation estimates from probes. The magnitude of the difference of the natural logarithm of two dissipation estimates should be smaller than diss_ratio_limit [math]\displaystyle{ \times \sigma_{\ln \varepsilon} }[/math]. Typically, 2.77. | ATOMIX |
despike_shear_fraction_limit | The maximum allowed fraction of data (of each diss_length_sec length) removed by de-spiking. Typically, 0.05. | ATOMIX |
despike_shear_iterations_limit | The maximum number of allowed iterations of de-spiking when producing the L2 shear probe data (one value per section). Typically 8. | ATOMIX |
variance_resolved_limit | The minimum fraction of variance resolved in an estimate by spectral integration. Typically 0.6. | ATOMIX |
f_limit | The upper limit to exclude frequencies from analysis. Typically infinity. | ATOMIX |
fit_2_isr | Dissipation threshold for using the method of fitting in the inertial subrange. Typically [math]\displaystyle{ 10^{−5} }[/math] W kg[math]\displaystyle{ ^{−1} }[/math]. | ATOMIX |
spectral_model | The model shear spectrum used in dissipation estimates with the integration method: e.g., Nasmyth, Lueck or Panchev-Kesich | ATOMIX |
area | The region where the data were collected, e.g., Arctic Ocean, Barents Sea | ATOMIX |
geospatial_vertical_min | Further refinement of the geospatial bounding box. Vertical minimum in m | ACDD |
geospatial_vertical_max | Further refinement of the geospatial bounding box. Vertical maximum in m | ACDD |
geospatial_vertical_positive | Direction of positive vertical: down, up | ACDD |
institution | The name of the institution principally responsible for originating this data | CF, ACDD |
principal_investigator | Name of the principal investigator who created the data | ATOMIX |
contact | Name of the contact person | ACDD |
project | The scientific project that produced the data | ACDD |
cruise | The name or number of the research cruise | ATOMIX |
vessel | The name of the research vessel | ATOMIX |
references | A list of related references | CF, ACDD |
keywords | A comma-separated list of keywords and phrases | ACDD |
creator_name | The data creator’s name | ACDD |
creator_email | The data creator’s email | ACDD |
creator_url | The data creator’s URL | ACDD |
acknowledgement | Acknowledgement of support for the project that produced this data | ACDD |
station_name | The name of the station where data were collected | ATOMIX |
license | Provide the URL to a standard or specific license, e.g, http://creativecommons.org/licenses/by/4.0/, Freely Distributed, or None | ACDD |
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